Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | LK406_01495 | P37777 | Positive | 341031 - 342089 | 40338.4 |
| cys-trna(pro) deacylase | LK406_01500 | O31650 | Negative | 342101 - 342592 | 17717.6 |
| duf5686 and carboxypeptidase regulatory-like domain-containing protein | LK406_01505 | T2KPJ3 | Positive | 342675 - 345167 | 93640.3 |
| had family phosphatase | LK406_01510 | Q9ZVJ5 | Positive | 345230 - 345889 | 23624.6 |
| dmt family protein | LK406_01515 | Not Available | Positive | 345896 - 346261 | 13761.3 |
| catb-related o-acetyltransferase | LK406_01520 | P50870 | Negative | 346220 - 346882 | 24615.2 |
| mfs transporter | LK406_01525 | P52067 | Negative | 346872 - 348065 | 42016.8 |
| transporter | LK406_01530 | Not Available | Negative | 348062 - 348970 | 33282.0 |
| gatb/yqey domain-containing protein | LK406_01535 | P54464 | Negative | 348972 - 349421 | 16033.6 |
| xanthan lyase | LK406_01540 | Q9AQS0 | Negative | 349452 - 352445 | 110599.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
