Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_01445 | Not Available | Negative | 330748 - 331146 | 14654.4 |
| saccharopine dehydrogenase family protein | LK406_01450 | P0DPE4 | Negative | 331488 - 332678 | 44156.4 |
| Trna-lys | Not Available | Not Available | Positive | 332900 - 332972 | Not Available |
| nitroreductase family protein | LK406_01460 | Q58779 | Positive | 333062 - 333703 | 23818.9 |
| arac family transcriptional regulator | LK406_01465 | Not Available | Positive | 333703 - 334230 | 20163.3 |
| heavy metal translocating p-type atpase | LK406_01470 | P37279 | Positive | 334326 - 336773 | 86866.1 |
| atp-binding cassette domain-containing protein | LK406_01475 | O34512 | Positive | 336974 - 338557 | 58596.1 |
| glucose-1-phosphate thymidylyltransferase rfba | LK406_01480 | P95778 | Positive | 338736 - 339617 | 32104.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LK406_01485 | P26394 | Positive | 339614 - 340177 | 21024.7 |
| dtdp-4-dehydrorhamnose reductase | LK406_01490 | Q2SYI1 | Positive | 340174 - 341034 | 30984.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
