Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpa | LK406_01395 | Q8A519 | Negative | 317963 - 319654 | 61474.0 |
| potassium-transporting atpase subunit f | LK406_01400 | Not Available | Negative | 319683 - 319763 | 3036.02 |
| sigma-54 dependent transcriptional regulator | LK406_01405 | Q06065 | Negative | 320157 - 321491 | 48962.9 |
| pyridoxal phosphate-dependent aminotransferase | LK406_01410 | Q08432 | Positive | 321623 - 322786 | 43070.6 |
| endonuclease/exonuclease/phosphatase family protein | LK406_01415 | Q5UQW5 | Positive | 322786 - 323622 | 30993.1 |
| dmt family transporter | LK406_01420 | O28720 | Negative | 323661 - 324539 | 30546.0 |
| tonb-dependent receptor | LK406_01425 | Q6LLU3 | Negative | 324786 - 326774 | 73101.7 |
| pectate lyase | LK406_01430 | Not Available | Negative | 326980 - 328080 | 41365.1 |
| cysteate synthase | LK406_01435 | Q8Q0K3 | Negative | 328101 - 329393 | 47180.4 |
| carboxynorspermidine decarboxylase | LK406_01440 | A8FNH9 | Negative | 329413 - 330552 | 42439.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
