Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | LK406_01345 | T2KNB8 | Negative | 303842 - 305665 | 68852.6 |
| tonb-dependent receptor | LK406_01350 | T2KPJ3 | Negative | 305678 - 308830 | 115550.0 |
| hypothetical protein | LK406_01355 | Not Available | Positive | 309211 - 309618 | 15991.2 |
| duf3440 domain-containing protein | LK406_01360 | P77216 | Positive | 309615 - 310931 | 52153.4 |
| parb/repb/spo0j family partition protein | LK406_01365 | P77174 | Positive | 310876 - 311430 | 21546.7 |
| hamp domain-containing protein | LK406_01370 | O34206 | Negative | 311489 - 313207 | 64698.3 |
| sensor protein kdpd | LK406_01375 | P73870 | Negative | 313211 - 314338 | 42667.7 |
| hypothetical protein | LK406_01380 | Not Available | Negative | 314343 - 315071 | 26575.4 |
| k(+)-transporting atpase subunit c | LK406_01385 | Q5LHU5 | Negative | 315321 - 315890 | 20563.6 |
| potassium-transporting atpase subunit kdpb | LK406_01390 | Q9RZP0 | Negative | 315906 - 317948 | 72919.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
