Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_01295 | Not Available | Negative | 288067 - 288435 | 13290.3 |
| superoxide dismutase | LK406_01300 | Not Available | Negative | 288725 - 289019 | 11025.3 |
| hypothetical protein | LK406_01305 | Not Available | Negative | 289019 - 290548 | 55595.3 |
| duf4843 domain-containing protein | LK406_01310 | Not Available | Negative | 290588 - 291271 | 25904.5 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_01315 | T2KN63 | Negative | 291277 - 292689 | 53477.2 |
| susc/raga family tonb-linked outer membrane protein | LK406_01320 | T2KPJ3 | Negative | 292693 - 295674 | 110283.0 |
| s8 family serine peptidase | LK406_01325 | Q45670 | Positive | 295872 - 298589 | 97449.1 |
| porv/porq family protein | LK406_01330 | Not Available | Positive | 298603 - 299559 | 33592.6 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | LK406_01335 | G4RK44 | Positive | 299733 - 302009 | 87159.6 |
| glycoside hydrolase family 15 protein | LK406_01340 | P71741 | Positive | 301999 - 303789 | 69633.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
