Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | LK406_01245 | B7GIU0 | Positive | 278691 - 279311 | 23474.3 |
| hypothetical protein | LK406_01250 | Not Available | Positive | 279739 - 280179 | 16879.3 |
| dna mismatch repair protein muts | LK406_01255 | A6KZM1 | Negative | 280328 - 282961 | 98454.7 |
| uracil-dna glycosylase family protein | LK406_01260 | Not Available | Negative | 283209 - 283784 | 21747.2 |
| aaa family atpase | LK406_01265 | Q9RT63 | Negative | 283777 - 285192 | 53365.6 |
| hypothetical protein | LK406_01270 | Not Available | Positive | 285241 - 285876 | 24101.2 |
| duf3822 family protein | LK406_01275 | Not Available | Positive | 285854 - 286468 | 22459.9 |
| rsmd family rna methyltransferase | LK406_01280 | Q89B29 | Positive | 286459 - 286995 | 20055.0 |
| Trna-asp | Not Available | Not Available | Positive | 287051 - 287124 | Not Available |
| hypothetical protein | LK406_01290 | Not Available | Negative | 287379 - 287960 | 23085.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
