Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | LK406_01195 | Q64TC3 | Positive | 264609 - 266273 | 59492.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | LK406_01200 | Q3Z8H5 | Positive | 266377 - 267564 | 44440.6 |
| acyltransferase | LK406_01205 | P29113 | Negative | 267686 - 268834 | 42541.8 |
| peptidylprolyl isomerase | LK406_01210 | P29820 | Negative | 268839 - 269279 | 16062.1 |
| acyltransferase | LK406_01215 | P29113 | Negative | 269302 - 270435 | 41575.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | LK406_01220 | A6L404 | Negative | 270490 - 271659 | 42359.8 |
| Tmrna,resume consensus sequence (at 88): tacaaatggcaataacag | Not Available | Not Available | Positive | 271882 - 272283 | Not Available |
| response regulator | LK406_01230 | Q9P896 | Negative | 272381 - 275578 | 120679.0 |
| atp-binding cassette domain-containing protein | LK406_01235 | O34814 | Positive | 275804 - 276547 | 28028.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | LK406_01240 | P05652 | Positive | 276657 - 278615 | 72903.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
