Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | LK406_01095 | Q9CNV8 | Positive | 242169 - 242951 | 28571.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | LK406_01100 | Q8AAB1 | Positive | 243074 - 244918 | 67161.7 |
| alpha/beta hydrolase | LK406_01105 | P16854 | Negative | 244995 - 245936 | 35324.3 |
| duf2461 domain-containing protein | LK406_01110 | Not Available | Negative | 245938 - 246618 | 26102.0 |
| serine hydroxymethyltransferase | LK406_01115 | B2RGR2 | Negative | 246620 - 247900 | 46607.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | LK406_01120 | Q9X248 | Positive | 248210 - 248956 | 26084.7 |
| porv/porq family protein | LK406_01125 | Not Available | Positive | 249239 - 250120 | 32714.0 |
| low molecular weight phosphotyrosine protein phosphatase | LK406_01130 | Q55535 | Negative | 250098 - 250586 | 18690.3 |
| doxx family protein | LK406_01135 | Not Available | Positive | 250637 - 251050 | 15264.2 |
| ytfj family protein | LK406_01140 | Not Available | Positive | 251154 - 251672 | 19072.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
