Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | LK406_01045 | Q45061 | Negative | 232491 - 232904 | 16570.0 |
| fad synthase | LK406_01050 | A4IT50 | Negative | 232959 - 233543 | 21245.8 |
| redox-sensing transcriptional repressor rex | LK406_01055 | Q03VB1 | Negative | 233536 - 234189 | 23931.1 |
| lysm peptidoglycan-binding domain-containing protein | LK406_01060 | P44493 | Negative | 234197 - 236017 | 68054.5 |
| 3'-5' exonuclease | LK406_01065 | Q038M0 | Negative | 236020 - 236787 | 29450.2 |
| dna polymerase iii subunit beta | LK406_01070 | P0A120 | Negative | 236798 - 237922 | 40729.2 |
| nucleoside phosphorylase | LK406_01075 | Q5JJC1 | Negative | 237956 - 238837 | 32473.1 |
| phosphoglucosamine mutase | LK406_01080 | Q68BJ6 | Positive | 238950 - 240338 | 50437.6 |
| copper resistance protein nlpe | LK406_01085 | P40710 | Positive | 240350 - 240793 | 16060.0 |
| dipeptidase | LK406_01090 | Q6Q0N1 | Positive | 240798 - 242162 | 49713.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
