Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pur family dna/rna-binding protein | LK406_00995 | Not Available | Positive | 220939 - 221235 | 11459.5 |
| duf368 domain-containing protein | LK406_01000 | Not Available | Positive | 221464 - 222405 | 34443.1 |
| shikimate dehydrogenase | LK406_01005 | Q58484 | Positive | 222409 - 223149 | 26832.9 |
| energy transducer tonb | LK406_01010 | Not Available | Positive | 223146 - 223886 | 28223.8 |
| duf2007 domain-containing protein | LK406_01015 | Not Available | Negative | 223986 - 224195 | 7968.63 |
| dna polymerase iii subunit alpha | LK406_01020 | O51526 | Positive | 224354 - 228166 | 144795.0 |
| thioredoxin | LK406_01025 | P10472 | Positive | 228210 - 228524 | 11409.8 |
| aldose 1-epimerase | LK406_01030 | P39840 | Positive | 228527 - 229519 | 37062.2 |
| nitroreductase family protein | LK406_01035 | O26223 | Negative | 229560 - 230087 | 19805.8 |
| molecular chaperone htpg | LK406_01040 | P0CJ84 | Positive | 230312 - 232372 | 78920.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
