Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | LK406_00895 | Q5KW03 | Positive | 196085 - 196618 | 19332.2 |
| histidine kinase | LK406_00900 | Q6GK52 | Positive | 196629 - 197936 | 49946.7 |
| lyttr family dna-binding domain-containing protein | LK406_00905 | Q82Z76 | Positive | 197933 - 198694 | 29129.1 |
| duf4890 domain-containing protein | LK406_00910 | Not Available | Positive | 198843 - 199310 | 17584.4 |
| outer membrane beta-barrel protein | LK406_00915 | Not Available | Positive | 199543 - 202530 | 109766.0 |
| abc transporter permease | LK406_00920 | P0AFQ0 | Negative | 202680 - 203891 | 45039.7 |
| abc transporter permease | LK406_00925 | P37624 | Negative | 203893 - 205071 | 44111.4 |
| efflux rnd transporter periplasmic adaptor subunit | LK406_00930 | Q9ZJD1 | Negative | 205075 - 206064 | 35665.8 |
| tolc family protein | LK406_00935 | Q03027 | Negative | 206077 - 207531 | 53416.4 |
| dihydrofolate reductase family protein | LK406_00940 | P87241 | Negative | 207642 - 208718 | 38540.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
