Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | LK406_00845 | Q9LK39 | Negative | 181220 - 183127 | 70835.3 |
| translation elongation factor 4 | LK406_00850 | A6L744 | Negative | 183133 - 184923 | 66652.4 |
| diaminopimelate decarboxylase | LK406_00855 | Q8A800 | Positive | 185041 - 186204 | 43235.6 |
| dmt family transporter | LK406_00860 | Not Available | Positive | 186325 - 187227 | 33483.9 |
| ydei/ompd-associated family protein | LK406_00865 | Not Available | Positive | 187250 - 187825 | 22735.1 |
| trpb-like pyridoxal phosphate-dependent enzyme | LK406_00870 | O29028 | Negative | 187872 - 189233 | 49715.7 |
| phenylalanine--trna ligase subunit beta | LK406_00875 | Q64T65 | Positive | 189569 - 192034 | 90545.7 |
| hypothetical protein | LK406_00880 | Not Available | Positive | 192253 - 192924 | 24496.9 |
| beta-n-acetylhexosaminidase | LK406_00885 | P96155 | Negative | 192996 - 195155 | 81331.6 |
| nucleoside triphosphate pyrophosphohydrolase | LK406_00890 | P0AEY4 | Positive | 195229 - 196005 | 29480.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
