Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec domain-containing protein | LK406_00795 | Not Available | Negative | 169192 - 169785 | 23825.4 |
| efflux transporter outer membrane subunit | LK406_00800 | Q8XBY3 | Negative | 169906 - 171255 | 49172.9 |
| efflux rnd transporter permease subunit | LK406_00805 | Q8G2M6 | Negative | 171261 - 174428 | 115243.0 |
| superoxide dismutase | LK406_00810 | Not Available | Negative | 174425 - 175523 | 40464.9 |
| gnat family n-acetyltransferase | LK406_00815 | P94482 | Negative | 175536 - 176072 | 20564.5 |
| hypothetical protein | LK406_00820 | Not Available | Negative | 176291 - 176716 | 15735.8 |
| histidine kinase | LK406_00825 | Q5HLG3 | Positive | 176947 - 177999 | 40341.4 |
| lyttr family dna-binding domain-containing protein | LK406_00830 | Q87K77 | Positive | 178005 - 178763 | 28880.7 |
| site-specific integrase | LK406_00835 | Q88MV0 | Negative | 179560 - 180801 | 48244.5 |
| Trna-gly | Not Available | Not Available | Positive | 181082 - 181154 | Not Available |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
