Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | LK406_00745 | Q7NXP1 | Negative | 156816 - 158480 | 61006.9 |
| helix-turn-helix transcriptional regulator | LK406_00750 | O32071 | Negative | 158797 - 159693 | 34567.8 |
| nad(p)h-dependent oxidoreductase | LK406_00755 | Q9I509 | Positive | 159888 - 160424 | 19192.9 |
| aquaporin family protein | LK406_00760 | Q9X1E3 | Negative | 160508 - 161251 | 25780.0 |
| glycerol kinase glpk | LK406_00765 | Q2T0Z3 | Negative | 161255 - 162748 | 54902.3 |
| duf4180 domain-containing protein | LK406_00770 | Not Available | Positive | 162955 - 163317 | 13367.1 |
| hypothetical protein | LK406_00775 | Not Available | Negative | 163629 - 165242 | 63115.0 |
| atp-binding protein | LK406_00780 | Not Available | Negative | 165246 - 168251 | 116828.0 |
| helix-turn-helix domain-containing protein | LK406_00785 | Not Available | Negative | 168328 - 168648 | 12121.7 |
| superoxide dismutase | LK406_00790 | Not Available | Negative | 168664 - 168831 | 6415.89 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
