Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5677 domain-containing protein | LK406_00645 | Not Available | Negative | 139256 - 140059 | 31156.4 |
| is982 family transposase | LK406_00650 | Not Available | Positive | 140111 - 141088 | 37342.0 |
| nucleotidyltransferase domain-containing protein | LK406_00655 | Not Available | Positive | 141531 - 142430 | 34956.9 |
| hypothetical protein | LK406_00660 | Not Available | Negative | 142503 - 142712 | 8171.84 |
| hypothetical protein | LK406_00665 | Not Available | Negative | 142806 - 143321 | 19552.5 |
| relaxase/mobilization nuclease domain-containing protein | LK406_00670 | Not Available | Negative | 143325 - 144416 | 40914.3 |
| mobc family plasmid mobilization relaxosome protein | LK406_00675 | Not Available | Negative | 144406 - 144552 | 5366.48 |
| hypothetical protein | LK406_00680 | Not Available | Negative | 144589 - 144762 | 6595.18 |
| helix-turn-helix domain-containing protein | LK406_00685 | Not Available | Negative | 145050 - 145259 | 8154.75 |
| hypothetical protein | LK406_00690 | Not Available | Negative | 145394 - 145774 | 14174.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
