Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobc family plasmid mobilization relaxosome protein | LK406_00595 | Not Available | Negative | 130363 - 130731 | 13690.0 |
| toprim domain-containing protein | LK406_00600 | P52308 | Negative | 130833 - 131855 | 38376.1 |
| virulence-associated e family protein | LK406_00605 | Not Available | Negative | 132083 - 133291 | 46197.9 |
| helix-turn-helix domain-containing protein | LK406_00610 | Not Available | Negative | 133281 - 133592 | 11747.2 |
| duf6043 family protein | LK406_00615 | Not Available | Negative | 133748 - 134677 | 35470.6 |
| hipa domain-containing protein | LK406_00620 | P44033 | Negative | 134691 - 135701 | 38358.6 |
| hipa n-terminal domain-containing protein | LK406_00625 | P44034 | Negative | 135704 - 136024 | 11987.3 |
| is110 family transposase | LK406_00630 | P20665 | Positive | 136239 - 137207 | 35660.5 |
| helix-turn-helix domain-containing protein | LK406_00635 | Q8EIX4 | Negative | 137230 - 137469 | 8850.95 |
| site-specific integrase | LK406_00640 | Not Available | Negative | 137610 - 138959 | 52754.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
