Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | LK406_00495 | P20665 | Positive | 109092 - 110060 | 35660.5 |
| duf4276 family protein | LK406_00500 | Not Available | Negative | 110057 - 110548 | 18546.6 |
| aaa family atpase | LK406_00505 | Not Available | Negative | 110554 - 111717 | 43961.9 |
| site-specific integrase | LK406_00510 | O26979 | Negative | 111807 - 113012 | 46549.9 |
| Trna-gly | Not Available | Not Available | Positive | 113192 - 113264 | Not Available |
| nitroreductase family protein | LK406_00520 | Q96VH4 | Negative | 113374 - 113976 | 23101.5 |
| aldehyde dehydrogenase | LK406_00525 | P29236 | Positive | 114075 - 115061 | 35947.9 |
| plasmid pria4b orf-3 family protein | LK406_00530 | Not Available | Positive | 115108 - 115620 | 20201.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | LK406_00535 | B3ES47 | Positive | 115610 - 116509 | 34189.9 |
| Trna-leu | Not Available | Not Available | Positive | 116613 - 116698 | Not Available |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
