Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | LK406_00395 | Not Available | Negative | 91832 - 93262 | 55436.9 |
| hypothetical protein | LK406_00400 | Not Available | Negative | 93265 - 93525 | 9610.82 |
| helix-turn-helix domain-containing protein | LK406_00405 | Not Available | Positive | 94805 - 94972 | 6440.84 |
| helix-turn-helix domain-containing protein | LK406_00410 | Not Available | Positive | 94995 - 95279 | 10781.8 |
| site-specific integrase | LK406_00415 | Q9PK47 | Negative | 95356 - 96579 | 47199.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 96831 - 96935 | Not Available |
| adp-ribosylglycohydrolase family protein | LK406_00425 | H3BCW1 | Negative | 97404 - 98729 | 50533.8 |
| hypothetical protein | LK406_00430 | Not Available | Negative | 98821 - 99243 | 17127.6 |
| hypothetical protein | LK406_00435 | Not Available | Negative | 99371 - 99856 | 18771.7 |
| hypothetical protein | LK406_00440 | Not Available | Negative | 99926 - 100342 | 16395.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
