Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | LK406_00345 | Q8G2M6 | Negative | 77792 - 80977 | 115177.0 |
| efflux rnd transporter periplasmic adaptor subunit | LK406_00350 | P37636 | Negative | 80974 - 82089 | 40047.2 |
| helix-turn-helix domain-containing protein | LK406_00355 | P77396 | Positive | 82235 - 83053 | 31133.8 |
| mate family efflux transporter | LK406_00360 | Q4L8N9 | Negative | 83070 - 84431 | 49381.1 |
| hypothetical protein | LK406_00365 | Not Available | Negative | 84876 - 85841 | 37351.9 |
| hepn domain-containing protein | LK406_00370 | Not Available | Positive | 86544 - 87446 | 35282.3 |
| bacteriophage abortive infection abih family protein | LK406_00375 | Not Available | Positive | 87459 - 88739 | 49175.2 |
| hypothetical protein | LK406_00380 | Not Available | Negative | 88799 - 89089 | 11116.5 |
| is982 family transposase | LK406_00385 | Not Available | Positive | 89481 - 90458 | 37342.0 |
| aaa family atpase | LK406_00390 | Not Available | Negative | 90460 - 91668 | 45588.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
