Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | LK406_00295 | P71057 | Negative | 65009 - 66097 | 42158.8 |
| lipopolysaccharide biosynthesis protein | LK406_00300 | O32273 | Negative | 66094 - 67521 | 52848.0 |
| capsular biosynthesis protein | LK406_00305 | P96717 | Negative | 67811 - 68530 | 27486.2 |
| polysaccharide biosynthesis tyrosine autokinase | LK406_00310 | O52788 | Negative | 68523 - 70952 | 90693.5 |
| polysaccharide biosynthesis/export family protein | LK406_00315 | P58597 | Negative | 70964 - 71761 | 28924.8 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | LK406_00320 | O34753 | Negative | 71802 - 72968 | 42406.7 |
| hypothetical protein | LK406_00325 | Not Available | Negative | 73059 - 73478 | 16268.3 |
| transcriptional regulator | LK406_00330 | Not Available | Negative | 73503 - 74603 | 42593.2 |
| duf2971 domain-containing protein | LK406_00335 | Not Available | Positive | 75233 - 76312 | 41720.9 |
| tolc family protein | LK406_00340 | Q8CWA4 | Negative | 76422 - 77792 | 49885.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
