Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | LK406_00245 | Q59002 | Negative | 54212 - 55369 | 44051.7 |
| alpha-1,2-fucosyltransferase | LK406_00250 | Q58YV9 | Negative | 55386 - 56210 | 31628.3 |
| glycosyltransferase | LK406_00255 | C3PK12 | Negative | 56233 - 57408 | 44907.1 |
| acyltransferase | LK406_00260 | Not Available | Negative | 57416 - 58399 | 37279.4 |
| o-antigen ligase family protein | LK406_00265 | Not Available | Negative | 58472 - 59575 | 41274.5 |
| glycosyltransferase family 4 protein | LK406_00270 | P39859 | Negative | 59627 - 60865 | 47648.0 |
| glycosyltransferase | LK406_00275 | Q46634 | Negative | 60844 - 62031 | 45425.4 |
| acyltransferase | LK406_00280 | Q52778 | Negative | 62003 - 62977 | 37513.3 |
| hypothetical protein | LK406_00285 | Not Available | Negative | 62977 - 64143 | 44085.2 |
| polysaccharide pyruvyl transferase family protein | LK406_00290 | Q5URA5 | Negative | 64150 - 65025 | 33052.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
