Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | LK406_00195 | Q01609 | Positive | 46128 - 47171 | 38731.6 |
| flavin reductase | LK406_00200 | Not Available | Positive | 47184 - 48179 | 37080.7 |
| carboxymuconolactone decarboxylase family protein | LK406_00205 | P20370 | Positive | 48186 - 49001 | 30232.7 |
| helix-turn-helix transcriptional regulator | LK406_00210 | O31679 | Negative | 49079 - 49438 | 13778.0 |
| heme-binding protein | LK406_00215 | P45517 | Positive | 49560 - 50045 | 17035.7 |
| gdp-l-fucose synthase | LK406_00220 | O49213 | Negative | 50190 - 51134 | 35742.7 |
| gdp-mannose 4,6-dehydratase | LK406_00225 | A8Y0L5 | Negative | 51142 - 52230 | 40924.6 |
| glycosyltransferase | LK406_00230 | P0A5A0 | Negative | 52259 - 53041 | 29727.5 |
| putative colanic acid biosynthesis acetyltransferase | LK406_00235 | P0ACD2 | Negative | 53079 - 53639 | 20804.4 |
| serine acetyltransferase | LK406_00240 | Q56002 | Negative | 53655 - 54107 | 16323.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
