Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_00145 | Q56078 | Negative | 35296 - 37518 | 80901.9 |
| phosphodiester glycosidase family protein | LK406_00150 | Q8BJ48 | Positive | 37696 - 38550 | 31338.4 |
| helix-turn-helix transcriptional regulator | LK406_00155 | A8AL27 | Negative | 38647 - 39546 | 34611.5 |
| carboxymuconolactone decarboxylase family protein | LK406_00160 | Q01609 | Positive | 39832 - 41508 | 60687.4 |
| cupin domain-containing protein | LK406_00165 | Not Available | Positive | 41518 - 41982 | 16130.1 |
| flavodoxin | LK406_00170 | Not Available | Positive | 42025 - 42669 | 23275.4 |
| arac family transcriptional regulator | LK406_00175 | P26993 | Positive | 42733 - 43548 | 31791.2 |
| sugar o-acetyltransferase | LK406_00180 | Q09707 | Positive | 43647 - 44216 | 20425.7 |
| aldo/keto reductase | LK406_00185 | C6TBN2 | Positive | 44220 - 45377 | 42940.5 |
| dihydrofolate reductase family protein | LK406_00190 | Q58085 | Positive | 45406 - 46089 | 24903.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
