Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | LK406_00095 | C6TBN2 | Positive | 21681 - 23060 | 51820.0 |
| mate family efflux transporter | LK406_00100 | Q8EIX5 | Positive | 23163 - 24515 | 49193.6 |
| crp/fnr family transcriptional regulator | LK406_00105 | Not Available | Positive | 24597 - 25175 | 21924.2 |
| tolc family protein | LK406_00110 | O31101 | Negative | 25185 - 26582 | 51662.0 |
| multidrug efflux rnd transporter permease subunit | LK406_00115 | Q8G2M6 | Negative | 26579 - 29677 | 113468.0 |
| efflux rnd transporter periplasmic adaptor subunit | LK406_00120 | Q8G2M7 | Negative | 29684 - 30949 | 46832.3 |
| mbl fold metallo-hydrolase | LK406_00125 | P9WKP2 | Positive | 31210 - 32259 | 39352.3 |
| duf2023 family protein | LK406_00130 | Not Available | Negative | 32304 - 32660 | 13715.0 |
| flavodoxin | LK406_00135 | P61951 | Negative | 32663 - 33154 | 17145.7 |
| glycoside hydrolase family 97 protein | LK406_00140 | Q8A6L0 | Negative | 33286 - 35283 | 74061.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
