Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | LK406_00045 | Q8G2M6 | Negative | 8022 - 11207 | 115145.0 |
| efflux rnd transporter periplasmic adaptor subunit | LK406_00050 | Q8X4L0 | Negative | 11211 - 12395 | 41458.1 |
| helix-turn-helix domain-containing protein | LK406_00055 | P32677 | Positive | 12561 - 13409 | 32773.2 |
| class i fructose-bisphosphate aldolase | LK406_00060 | P0A992 | Positive | 13487 - 14539 | 38018.2 |
| 2-hydroxyacid dehydrogenase | LK406_00065 | P44501 | Positive | 14588 - 15607 | 37846.2 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | LK406_00070 | Q8A8R2 | Positive | 15610 - 16353 | 28064.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | LK406_00075 | Q67NB6 | Positive | 16602 - 18359 | 63552.2 |
| carboxymuconolactone decarboxylase family protein | LK406_00080 | P20370 | Positive | 18363 - 19589 | 43995.5 |
| flavodoxin family protein | LK406_00085 | O28836 | Positive | 19620 - 20159 | 20039.2 |
| 4fe-4s binding protein | LK406_00090 | Q50235 | Positive | 20188 - 21669 | 54702.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
