Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_11015 | Not Available | Negative | 2712763 - 2713038 | 10184.2 |
| Immunity repressor | LK406_11020 | P06153 | Negative | 2713303 - 2713554 | 9369.48 |
| Attr | Not Available | Not Available | Positive | 2716201 - 2716212 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 336 - 409 | Not Available |
| fimbrillin family protein | LK406_00015 | Not Available | Positive | 655 - 1977 | 45690.4 |
| homoserine dehydrogenase | LK406_00020 | P19582 | Negative | 2018 - 3226 | 45566.8 |
| homoserine o-acetyltransferase | LK406_00025 | K4ICC9 | Negative | 3393 - 4427 | 38195.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | LK406_00030 | Q5SK88 | Negative | 4427 - 5713 | 46604.2 |
| tetr/acrr family transcriptional regulator | LK406_00035 | Not Available | Negative | 6070 - 6648 | 22657.4 |
| tolc family protein | LK406_00040 | Q8CWA4 | Negative | 6648 - 8018 | 49552.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
