Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | NQ519_16095 | P27771 | Negative | 4005334 - 4006119 | 27193.1 |
| yggs family pyridoxal phosphate-dependent enzyme | NQ519_16100 | O66631 | Negative | 4006130 - 4006798 | 24979.1 |
| duf4784 domain-containing protein | NQ519_16105 | Not Available | Negative | 4006871 - 4008088 | 42583.1 |
| c69 family dipeptidase | NQ519_16110 | O85304 | Positive | 4008315 - 4010009 | 63045.3 |
| dihydrolipoyl dehydrogenase | NQ519_16115 | P50970 | Positive | 4010009 - 4011385 | 48628.9 |
| pldc n-terminal domain-containing protein | NQ519_16120 | Not Available | Negative | 4011442 - 4011630 | 7158.98 |
| trna pseudouridine(38-40) synthase trua | NQ519_16125 | Q5LGZ6 | Negative | 4011627 - 4012406 | 29408.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | NQ519_16130 | A0LZI4 | Positive | 4012660 - 4013418 | 27370.8 |
| signal peptidase i | NQ519_16135 | P57347 | Positive | 4013458 - 4014810 | 52580.1 |
| yigz family protein | NQ519_16140 | P32437 | Positive | 4014813 - 4015424 | 22538.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
