Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | NQ519_15795 | Q8BJ48 | Negative | 3934969 - 3935823 | 31338.4 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ519_15800 | Q56078 | Positive | 3936001 - 3938223 | 80901.9 |
| glycoside hydrolase family 97 protein | NQ519_15805 | Q8A6L0 | Positive | 3938236 - 3940233 | 74061.0 |
| flavodoxin | NQ519_15810 | P61951 | Positive | 3940365 - 3940856 | 17145.7 |
| duf2023 family protein | NQ519_15815 | Not Available | Positive | 3940859 - 3941215 | 13715.0 |
| mbl fold metallo-hydrolase | NQ519_15820 | P9WKP2 | Negative | 3941260 - 3942309 | 39352.3 |
| efflux rnd transporter periplasmic adaptor subunit | NQ519_15825 | Q8G2M7 | Positive | 3942570 - 3943835 | 46832.3 |
| multidrug efflux rnd transporter permease subunit | NQ519_15830 | Q8G2M6 | Positive | 3943842 - 3946940 | 113468.0 |
| tolc family protein | NQ519_15835 | O31101 | Positive | 3946937 - 3948334 | 51662.0 |
| crp/fnr family transcriptional regulator | NQ519_15840 | Not Available | Negative | 3948344 - 3948922 | 21924.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
