Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | NQ519_15345 | P52308 | Positive | 3841664 - 3842686 | 38376.1 |
| mobc family plasmid mobilization relaxosome protein | NQ519_15350 | Not Available | Positive | 3842788 - 3843156 | 13690.0 |
| relaxase/mobilization nuclease domain-containing protein | NQ519_15355 | Not Available | Positive | 3843146 - 3844222 | 39962.3 |
| hypothetical protein | NQ519_15360 | Not Available | Positive | 3844241 - 3845014 | 29695.4 |
| thioredoxin family protein | NQ519_15365 | Q7KQL8 | Positive | 3845331 - 3845687 | 13266.1 |
| thioredoxin family protein | NQ519_15370 | P14949 | Positive | 3845709 - 3846233 | 19657.0 |
| hypothetical protein | NQ519_15375 | Not Available | Negative | 3846371 - 3847642 | 45940.0 |
| hypothetical protein | NQ519_15380 | Not Available | Negative | 3847679 - 3847903 | 8271.69 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_15385 | Not Available | Negative | 3847917 - 3849293 | 52478.5 |
| susc/raga family tonb-linked outer membrane protein | NQ519_15390 | Q8A1G1 | Negative | 3849324 - 3852713 | 124494.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
