Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is982 family transposase | NQ519_15295 | Not Available | Negative | 3832431 - 3833408 | 37213.8 |
| duf5677 domain-containing protein | NQ519_15300 | Not Available | Positive | 3833460 - 3834263 | 31156.4 |
| site-specific integrase | NQ519_15305 | Not Available | Positive | 3834560 - 3835909 | 52754.6 |
| helix-turn-helix domain-containing protein | NQ519_15310 | Q8EIX4 | Positive | 3836050 - 3836289 | 8850.95 |
| is110 family transposase | NQ519_15315 | P20665 | Negative | 3836312 - 3837280 | 35660.5 |
| hipa n-terminal domain-containing protein | NQ519_15320 | P44034 | Positive | 3837495 - 3837815 | 11987.3 |
| hipa domain-containing protein | NQ519_15325 | P44033 | Positive | 3837818 - 3838828 | 38358.6 |
| duf6043 family protein | NQ519_15330 | Not Available | Positive | 3838842 - 3839771 | 35470.6 |
| helix-turn-helix domain-containing protein | NQ519_15335 | Not Available | Positive | 3839927 - 3840238 | 11747.2 |
| virulence-associated e family protein | NQ519_15340 | Not Available | Positive | 3840228 - 3841436 | 46197.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
