Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | NQ519_14995 | Not Available | Negative | 3762037 - 3763374 | 50187.6 |
| metallophosphoesterase | NQ519_15000 | O34870 | Positive | 3763653 - 3764810 | 43874.7 |
| dihydrofolate reductase family protein | NQ519_15005 | P87241 | Positive | 3764801 - 3765877 | 38540.7 |
| tolc family protein | NQ519_15010 | Q03027 | Positive | 3765988 - 3767442 | 53416.4 |
| efflux rnd transporter periplasmic adaptor subunit | NQ519_15015 | Q9ZJD1 | Positive | 3767455 - 3768444 | 35665.8 |
| abc transporter permease | NQ519_15020 | P37624 | Positive | 3768448 - 3769626 | 44111.4 |
| abc transporter permease | NQ519_15025 | P0AFQ0 | Positive | 3769628 - 3770839 | 45039.7 |
| outer membrane beta-barrel protein | NQ519_15030 | Not Available | Negative | 3770989 - 3773976 | 109766.0 |
| duf4890 domain-containing protein | NQ519_15035 | Not Available | Negative | 3774209 - 3774676 | 17584.4 |
| lyttr family dna-binding domain-containing protein | NQ519_15040 | Q82Z76 | Negative | 3774825 - 3775586 | 29129.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
