Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | NQ519_14595 | T2KPJ3 | Positive | 3664689 - 3667841 | 115550.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_14600 | T2KNB8 | Positive | 3667854 - 3669677 | 68852.6 |
| glycoside hydrolase family 15 protein | NQ519_14605 | P71741 | Negative | 3669730 - 3671520 | 69633.0 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | NQ519_14610 | G4RK44 | Negative | 3671510 - 3673786 | 87159.6 |
| porv/porq family protein | NQ519_14615 | Not Available | Negative | 3673960 - 3674916 | 33592.6 |
| s8 family serine peptidase | NQ519_14620 | Q45670 | Negative | 3674930 - 3677647 | 97449.1 |
| susc/raga family tonb-linked outer membrane protein | NQ519_14625 | T2KPJ3 | Positive | 3677845 - 3680826 | 110283.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_14630 | T2KN63 | Positive | 3680830 - 3682242 | 53477.2 |
| duf4843 domain-containing protein | NQ519_14635 | Not Available | Positive | 3682248 - 3682931 | 25904.5 |
| hypothetical protein | NQ519_14640 | Not Available | Positive | 3682971 - 3684500 | 55595.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
