Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | NQ519_14495 | P0DPE4 | Positive | 3640841 - 3642031 | 44156.4 |
| hypothetical protein | NQ519_14500 | Not Available | Positive | 3642373 - 3642771 | 14654.4 |
| carboxynorspermidine decarboxylase | NQ519_14505 | A8FNH9 | Positive | 3642967 - 3644106 | 42439.7 |
| cysteate synthase | NQ519_14510 | Q8Q0K3 | Positive | 3644126 - 3645418 | 47180.4 |
| pectate lyase | NQ519_14515 | Not Available | Positive | 3645439 - 3646539 | 41365.1 |
| tonb-dependent receptor | NQ519_14520 | Q6LLU3 | Positive | 3646745 - 3648733 | 73101.7 |
| dmt family transporter | NQ519_14525 | O28720 | Positive | 3648980 - 3649858 | 30546.0 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_14530 | Q5UQW5 | Negative | 3649897 - 3650733 | 30993.1 |
| pyridoxal phosphate-dependent aminotransferase | NQ519_14535 | Q08432 | Negative | 3650733 - 3651896 | 43070.6 |
| sigma-54 dependent transcriptional regulator | NQ519_14540 | Q06065 | Positive | 3652028 - 3653362 | 48962.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
