Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | NQ519_14195 | B4EUT8 | Positive | 3547889 - 3548497 | 21983.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | NQ519_14200 | Q02PF8 | Positive | 3548521 - 3549783 | 46470.5 |
| rna polymerase sigma-70 factor | NQ519_14205 | Q06198 | Positive | 3549932 - 3550483 | 21683.1 |
| fecr domain-containing protein | NQ519_14210 | Not Available | Positive | 3550553 - 3551536 | 37685.0 |
| tonb-dependent receptor | NQ519_14215 | T2KM18 | Positive | 3551759 - 3555262 | 130521.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_14220 | T2KNB8 | Positive | 3555276 - 3557030 | 66097.9 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_14225 | Not Available | Positive | 3557055 - 3557930 | 32396.1 |
| duf5689 domain-containing protein | NQ519_14230 | Not Available | Positive | 3557937 - 3560159 | 78806.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ519_14235 | A7LXS8 | Positive | 3560233 - 3562329 | 77108.2 |
| beta-n-acetylhexosaminidase | NQ519_14240 | P49008 | Negative | 3562393 - 3563979 | 60199.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
