Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is982 family transposase | NQ519_13895 | Not Available | Negative | 3468011 - 3468988 | 37342.0 |
| glycoside hydrolase family 88 protein | NQ519_13900 | T2KLZ3 | Positive | 3469380 - 3470552 | 44148.5 |
| tonb-dependent receptor | NQ519_13905 | T2KMI3 | Positive | 3470718 - 3473867 | 117095.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_13910 | T2KN63 | Positive | 3473879 - 3475747 | 70599.1 |
| susc/raga family tonb-linked outer membrane protein | NQ519_13915 | T2KM18 | Positive | 3475764 - 3478637 | 105818.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_13920 | T2KPM5 | Positive | 3478650 - 3480422 | 66414.5 |
| duf1735 domain-containing protein | NQ519_13925 | Not Available | Positive | 3480437 - 3481483 | 38758.3 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_13930 | Not Available | Positive | 3481493 - 3482470 | 37041.6 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_13935 | Q5UQW5 | Positive | 3482526 - 3483449 | 34689.5 |
| alginate lyase family protein | NQ519_13940 | Q4KHY5 | Positive | 3483489 - 3484661 | 44760.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
