Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase family protein | NQ519_13795 | Not Available | Positive | 3442761 - 3444086 | 50059.0 |
| rtec domain-containing protein | NQ519_13800 | Not Available | Positive | 3444638 - 3445483 | 33231.9 |
| moba protein | NQ519_13805 | Not Available | Negative | 3445490 - 3445912 | 16234.7 |
| helix-turn-helix transcriptional regulator | NQ519_13810 | Q5WNW9 | Positive | 3446752 - 3446955 | 7781.59 |
| duf2971 domain-containing protein | NQ519_13815 | Not Available | Positive | 3446963 - 3447724 | 29489.6 |
| pddexk nuclease domain-containing protein | NQ519_13820 | P45423 | Positive | 3447787 - 3448821 | 40344.8 |
| atp-dependent endonuclease | NQ519_13825 | P0DW47 | Positive | 3448838 - 3450988 | 83291.6 |
| uvrd-helicase domain-containing protein | NQ519_13830 | P0DW48 | Positive | 3450997 - 3452841 | 70232.1 |
| site-specific integrase | NQ519_13835 | Q980D9 | Negative | 3453258 - 3454538 | 49756.3 |
| site-specific integrase | NQ519_13840 | Q7ZAJ8 | Negative | 3454562 - 3455782 | 46241.8 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
