Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh peroxidase | NQ519_13645 | Q97D82 | Positive | 3414969 - 3415523 | 20914.8 |
| duf5036 family protein | NQ519_13650 | Not Available | Positive | 3415652 - 3416386 | 26296.5 |
| hypothetical protein | NQ519_13655 | Not Available | Negative | 3416440 - 3416775 | 12283.2 |
| ytxh domain-containing protein | NQ519_13660 | Not Available | Negative | 3416789 - 3416998 | 7563.28 |
| duf1273 domain-containing protein | NQ519_13665 | A0RC08 | Positive | 3417068 - 3417577 | 18403.2 |
| site-specific integrase | NQ519_13670 | Q980D9 | Positive | 3417859 - 3419088 | 47241.0 |
| duf3408 domain-containing protein | NQ519_13675 | Not Available | Negative | 3419385 - 3419882 | 18941.6 |
| hypothetical protein | NQ519_13680 | Not Available | Positive | 3420339 - 3420626 | 11297.8 |
| reverse transcriptase domain-containing protein | NQ519_13685 | P0A3U0 | Positive | 3421172 - 3422980 | 70640.6 |
| hypothetical protein | NQ519_13690 | Not Available | Positive | 3423018 - 3423248 | 8997.08 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
