Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronate isomerase | NQ519_13445 | A6L4U4 | Positive | 3369667 - 3371079 | 54824.9 |
| sugar kinase | NQ519_13450 | D4GSE6 | Positive | 3371094 - 3372113 | 37147.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | NQ519_13455 | P0A957 | Positive | 3372272 - 3372940 | 23941.2 |
| mfs transporter | NQ519_13460 | P0AA79 | Positive | 3373046 - 3374509 | 54023.6 |
| tagaturonate reductase | NQ519_13465 | Q97L67 | Positive | 3374529 - 3375986 | 55544.8 |
| altronate dehydratase family protein | NQ519_13470 | O34673 | Positive | 3376126 - 3377616 | 54164.6 |
| pectinesterase family protein | NQ519_13475 | Q9FM79 | Positive | 3377624 - 3378745 | 41943.6 |
| fimbrillin family protein | NQ519_13480 | Not Available | Negative | 3378760 - 3381474 | 98600.0 |
| mate family efflux transporter | NQ519_13485 | P28303 | Negative | 3381535 - 3382860 | 48743.6 |
| rrna pseudouridine synthase | NQ519_13490 | P35159 | Positive | 3383003 - 3384301 | 49980.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
