Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase/topoisomerase iv subunit a | NQ519_13395 | O51066 | Positive | 3354534 - 3357398 | 107400.0 |
| shikimate kinase | NQ519_13400 | A6LFQ8 | Positive | 3357412 - 3357939 | 19578.6 |
| glutamate racemase | NQ519_13405 | A5UTG1 | Positive | 3357953 - 3358750 | 28383.2 |
| dna translocase ftsk 4tm domain-containing protein | NQ519_13410 | Q8KBK0 | Positive | 3358952 - 3361756 | 101817.0 |
| hypothetical protein | NQ519_13415 | Not Available | Positive | 3361866 - 3362450 | 21095.9 |
| hypothetical protein | NQ519_13420 | Not Available | Positive | 3362456 - 3362674 | 8313.51 |
| dna gyrase subunit a | NQ519_13425 | P0C0R0 | Positive | 3362964 - 3365516 | 94850.0 |
| tetratricopeptide repeat protein | NQ519_13430 | Q64112 | Positive | 3365554 - 3366915 | 50568.1 |
| sugar kinase | NQ519_13435 | D4GSE6 | Negative | 3367123 - 3368169 | 38272.4 |
| duf4861 domain-containing protein | NQ519_13440 | T2KN67 | Negative | 3368338 - 3369459 | 40988.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
