Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | NQ519_13245 | Q8A9H7 | Positive | 3315918 - 3316619 | 25711.9 |
| duf4831 family protein | NQ519_13250 | Not Available | Positive | 3316673 - 3317566 | 32100.5 |
| dna alkylation repair protein | NQ519_13255 | Not Available | Positive | 3317580 - 3318236 | 23447.9 |
| thioredoxin family protein | NQ519_13260 | Q5HQ29 | Negative | 3318233 - 3318556 | 12879.7 |
| nad-dependent epimerase/dehydratase family protein | NQ519_13265 | Q6DF08 | Negative | 3318576 - 3319541 | 35770.9 |
| dna repair protein rada | NQ519_13270 | P37572 | Negative | 3319606 - 3320979 | 49030.5 |
| hypothetical protein | NQ519_13275 | Not Available | Negative | 3320981 - 3321556 | 20550.7 |
| lactate utilization protein | NQ519_13280 | Not Available | Negative | 3321556 - 3322197 | 23494.3 |
| rip metalloprotease rsep | NQ519_13285 | O67776 | Negative | 3322204 - 3323535 | 50721.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | NQ519_13290 | Q8A684 | Negative | 3323621 - 3324784 | 41863.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
