Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence | NQ519_12995 | Not Available | Positive | 3254002 - 3255645 | 61497.2 |
| rok family protein | NQ519_13000 | P0A4E1 | Positive | 3255648 - 3256586 | 32068.7 |
| duf4962 domain-containing protein | NQ519_13005 | Not Available | Positive | 3256583 - 3259120 | 94867.6 |
| atp-binding protein | NQ519_13010 | T2KMF4 | Positive | 3259249 - 3263286 | 149610.0 |
| ribose-phosphate pyrophosphokinase | NQ519_13015 | Q7MT83 | Negative | 3263377 - 3264318 | 34221.6 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | NQ519_13020 | A6L4J3 | Negative | 3264481 - 3265077 | 22472.3 |
| site-specific integrase | NQ519_13025 | Q71Y59 | Positive | 3265557 - 3266789 | 47706.1 |
| is982 family transposase | NQ519_13030 | Not Available | Positive | 3266865 - 3267188 | 11777.5 |
| hypothetical protein | NQ519_13035 | Not Available | Positive | 3267382 - 3267735 | 13333.6 |
| sir2 family protein | NQ519_13040 | P55385 | Positive | 3267790 - 3270498 | 104132.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
