Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | NQ519_12895 | T2KLZ3 | Positive | 3214543 - 3215739 | 44991.0 |
| heparinase ii/iii family protein | NQ519_12900 | Q89YR9 | Positive | 3215778 - 3218675 | 109190.0 |
| duf4958 family protein | NQ519_12905 | Not Available | Positive | 3218696 - 3220864 | 77872.2 |
| tonb-dependent receptor | NQ519_12910 | T2KPJ3 | Positive | 3220885 - 3224040 | 116427.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_12915 | T2KN63 | Positive | 3224053 - 3225696 | 62524.7 |
| duf4981 domain-containing protein | NQ519_12920 | Q56307 | Negative | 3225781 - 3228888 | 116518.0 |
| beta-n-acetylhexosaminidase | NQ519_12925 | P49008 | Negative | 3228912 - 3230492 | 59820.9 |
| duf5689 domain-containing protein | NQ519_12930 | Not Available | Negative | 3230557 - 3232833 | 84054.7 |
| hypothetical protein | NQ519_12935 | Not Available | Negative | 3232859 - 3234415 | 56008.6 |
| bacon domain-containing protein | NQ519_12940 | Not Available | Negative | 3234436 - 3235461 | 36776.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
