Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | NQ519_12745 | Not Available | Positive | 3181608 - 3182135 | 19975.6 |
| ompa family protein | NQ519_12750 | Not Available | Positive | 3182141 - 3183796 | 64059.8 |
| radical sam protein | NQ519_12755 | Not Available | Positive | 3183799 - 3184689 | 34530.5 |
| hypothetical protein | NQ519_12760 | Not Available | Positive | 3184701 - 3184898 | 7387.88 |
| duf6047 family protein | NQ519_12765 | Not Available | Positive | 3184905 - 3186155 | 47124.9 |
| hypothetical protein | NQ519_12770 | Not Available | Positive | 3186278 - 3186637 | 14002.1 |
| is982 family transposase | NQ519_12775 | Not Available | Positive | 3186784 - 3186945 | 6329.57 |
| helix-turn-helix domain-containing protein | NQ519_12780 | Not Available | Positive | 3186947 - 3187249 | 11977.5 |
| site-specific integrase | NQ519_12785 | A8F7B4 | Negative | 3187292 - 3188554 | 48917.5 |
| hypothetical protein | NQ519_12790 | Not Available | Positive | 3189101 - 3189364 | 10112.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
