Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6528 family protein | NQ519_12695 | Not Available | Positive | 3165532 - 3166500 | 35840.9 |
| metallophosphoesterase | NQ519_12700 | Not Available | Positive | 3166519 - 3167670 | 43205.3 |
| hypothetical protein | NQ519_12705 | Not Available | Positive | 3167676 - 3169721 | 76219.4 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ519_12710 | P27034 | Positive | 3169730 - 3172195 | 91045.1 |
| glycoside hydrolase family 16 protein | NQ519_12715 | Q9ZG90 | Positive | 3172344 - 3174056 | 64074.9 |
| duf4981 domain-containing protein | NQ519_12720 | Q56307 | Positive | 3174168 - 3177281 | 118433.0 |
| rtec domain-containing protein | NQ519_12725 | Not Available | Positive | 3177509 - 3178108 | 23237.4 |
| hypothetical protein | NQ519_12730 | Not Available | Positive | 3178331 - 3178513 | 6354.36 |
| fimb/mfa2 family fimbrial subunit | NQ519_12735 | Not Available | Positive | 3178523 - 3179353 | 28845.8 |
| duf4906 domain-containing protein | NQ519_12740 | Not Available | Positive | 3179552 - 3181567 | 72319.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
