Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | NQ519_12645 | P23485 | Positive | 3148040 - 3148978 | 35564.4 |
| tonb-dependent receptor | NQ519_12650 | T2KM18 | Positive | 3149107 - 3152577 | 128853.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_12655 | T2KPM5 | Positive | 3152590 - 3154356 | 67292.9 |
| susc/raga family tonb-linked outer membrane protein | NQ519_12660 | T2KPJ3 | Positive | 3154386 - 3157160 | 102661.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_12665 | T2KN63 | Positive | 3157173 - 3158861 | 64085.7 |
| bacon domain-containing protein | NQ519_12670 | Not Available | Positive | 3158911 - 3160431 | 55766.8 |
| hypothetical protein | NQ519_12675 | Not Available | Positive | 3160444 - 3161931 | 55792.8 |
| duf4971 domain-containing protein | NQ519_12680 | Q9ZG90 | Positive | 3161949 - 3163028 | 40308.9 |
| glycoside hydrolase family 16 protein | NQ519_12685 | Q9ZG90 | Positive | 3163034 - 3163867 | 31518.8 |
| beta-n-acetylhexosaminidase | NQ519_12690 | P49008 | Positive | 3163883 - 3165502 | 61061.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
