Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | NQ519_12595 | Not Available | Positive | 3141174 - 3142079 | 33431.6 |
| integration host factor subunit beta | NQ519_12600 | P19436 | Negative | 3142265 - 3142537 | 10096.3 |
| hypothetical protein | NQ519_12605 | Not Available | Negative | 3142654 - 3142896 | 9596.45 |
| hypothetical protein | NQ519_12610 | Not Available | Negative | 3143011 - 3143274 | 9955.99 |
| parb/repb/spo0j family partition protein | NQ519_12615 | P26497 | Negative | 3143325 - 3145049 | 64792.1 |
| hypothetical protein | NQ519_12620 | Not Available | Negative | 3145068 - 3145298 | 9128.1 |
| hypothetical protein | NQ519_12625 | Not Available | Negative | 3145295 - 3145552 | 9698.52 |
| fusion protein | NQ519_12630 | Not Available | Negative | 3145600 - 3146604 | 37802.3 |
| hypothetical protein | NQ519_12635 | Not Available | Negative | 3146624 - 3146899 | 10092.7 |
| rna polymerase sigma-70 factor | NQ519_12640 | P46358 | Positive | 3147214 - 3147873 | 25305.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
