Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ519_12495 | Not Available | Negative | 3122144 - 3122320 | 6243.54 |
| duf1896 domain-containing protein | NQ519_12500 | Not Available | Negative | 3122307 - 3122747 | 16994.0 |
| duf3945 domain-containing protein | NQ519_12505 | Not Available | Negative | 3122753 - 3123655 | 34095.9 |
| hypothetical protein | NQ519_12510 | Not Available | Negative | 3123788 - 3124018 | 8594.09 |
| sir2 family protein | NQ519_12515 | P55385 | Negative | 3124245 - 3127376 | 119688.0 |
| is982 family transposase | NQ519_12520 | Not Available | Negative | 3127500 - 3129515 | 75836.5 |
| relaxase/mobilization nuclease domain-containing protein | NQ519_12525 | Not Available | Negative | 3129537 - 3130829 | 50097.2 |
| is982 family transposase | NQ519_12530 | Not Available | Negative | 3130814 - 3131239 | 16440.9 |
| para family protein | NQ519_12535 | Q72H90 | Positive | 3131821 - 3132594 | 29092.4 |
| duf3408 domain-containing protein | NQ519_12540 | Not Available | Positive | 3132587 - 3132970 | 14300.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
