Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | NQ519_12395 | Q8A1G1 | Negative | 3093840 - 3096776 | 107786.0 |
| duf2961 domain-containing protein | NQ519_12400 | Not Available | Negative | 3096794 - 3098380 | 59083.8 |
| carbohydrate kinase | NQ519_12405 | O59128 | Negative | 3098405 - 3099265 | 31141.2 |
| sugar porter family mfs transporter | NQ519_12410 | P46333 | Negative | 3099267 - 3100595 | 47561.6 |
| tetratricopeptide repeat protein | NQ519_12415 | Not Available | Positive | 3101721 - 3103349 | 62756.4 |
| hypothetical protein | NQ519_12420 | Not Available | Positive | 3103628 - 3104002 | 13515.5 |
| tail fiber domain-containing protein | NQ519_12425 | P07067 | Positive | 3104144 - 3104764 | 23247.7 |
| is982 family transposase | NQ519_12430 | P35835 | Positive | 3105441 - 3106376 | 32566.7 |
| methyltransferase domain-containing protein | NQ519_12435 | B6J5Y2 | Positive | 3106642 - 3107436 | 30390.0 |
| hypothetical protein | NQ519_12440 | Not Available | Negative | 3107429 - 3107902 | 17433.8 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
