Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | NQ519_12345 | Not Available | Positive | 3075216 - 3076910 | 63302.4 |
| duf5627 domain-containing protein | NQ519_12350 | Not Available | Positive | 3076925 - 3077947 | 38454.4 |
| glycosyl hydrolase-related protein | NQ519_12355 | Q9NTJ4 | Positive | 3077959 - 3081135 | 118490.0 |
| sulfatase-like hydrolase/transferase | NQ519_12360 | T2KPJ9 | Positive | 3081168 - 3084575 | 127033.0 |
| metallophosphoesterase | NQ519_12365 | O34986 | Positive | 3084677 - 3085654 | 36429.4 |
| substrate-binding domain-containing protein | NQ519_12370 | T2KMF4 | Negative | 3085772 - 3088450 | 101658.0 |
| carbohydrate-binding protein | NQ519_12375 | Not Available | Negative | 3088513 - 3089010 | 18556.4 |
| duf4185 domain-containing protein | NQ519_12380 | L7WU85 | Negative | 3089082 - 3090584 | 53926.2 |
| duf4185 domain-containing protein | NQ519_12385 | E1ACQ5 | Negative | 3090630 - 3092195 | 57902.2 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_12390 | Q8A1G2 | Negative | 3092230 - 3093828 | 61651.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
