Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | NQ519_12245 | Not Available | Negative | 3042630 - 3042959 | 13140.9 |
| helix-turn-helix domain-containing protein | NQ519_12250 | Not Available | Negative | 3042956 - 3043297 | 13500.4 |
| fic family protein | NQ519_12255 | Q9BVA6 | Negative | 3043464 - 3044501 | 38757.5 |
| site-specific integrase | NQ519_12260 | Q71Y59 | Negative | 3045013 - 3046245 | 47398.9 |
| Trna-ala | Not Available | Not Available | Positive | 3046550 - 3046623 | Not Available |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | NQ519_12270 | O53181 | Negative | 3046737 - 3047768 | 37965.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | NQ519_12275 | O53182 | Negative | 3047771 - 3049615 | 66613.7 |
| atp-binding cassette domain-containing protein | NQ519_12280 | O31716 | Positive | 3050065 - 3051678 | 60794.3 |
| laci family transcriptional regulator | NQ519_12285 | P37947 | Negative | 3051795 - 3052820 | 37877.8 |
| ribokinase | NQ519_12290 | P0A9J7 | Positive | 3053289 - 3054200 | 31769.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
